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GROMITA is a Graphical User Interface (GUI) front-end for the molecular sumulation package, GROMACS v.4.x.

It is written in perl, making extensive use of perl/tk achieving portability in a wide variety of operating systems and architectures.

GROMITA provides friendly to use buttons in a window-based environment while maintaining a terminal mode for the experienced user.

 

Development: 

Protein Structure & Molecular Modeling Laboratory

Institute of Biosciences & Applications

National Center for Scientific Research "Demokritos",

Ag. Paraskevi 15310, Athens-Greece

 

  v.1. ( Old Version)
>>> Version: v.3.01. >>> New Version: v.4.6. <<<  
  Compatible with the GROMACS-4  versions 4.0.x   Compatible with GROMACS versions 4.5.x   Compatible with GROMACS versions 4.6.x

 

 

References:

Zarkadas, C., Sellis, D., Vlassi M (2014). GROMITA-4.6: A Graphical User Interface to facilitate molecular simulations with GROMACS GPU-CPU versions 4.6.x. Current Trends in Structural Biology & 7th International Conference of the Hellenic Crystallographic Association, FORTH, Crete, Greece, 19-21 September 2014, p. 97

Sellis D., Vlachakis D., Vlassi M (2009). Gromita: A Fully Integrated Graphical User Interface to Gromacs 4. Bioinform Biol Insight 3: 99-102

 

Funding:

GSRT/KRIPIS action (“DIAS” project), funded by Greece and the European Regional Development Fund of the European Union (NSRF 2007-2013)

NCSR "DEMOKRITOS"/DEMOEREVNA


 

Copyright ©2009-2015 PROTEIN STRUCTURE & MOLECULAR MODELING LAB,

INSTITUTE OF BIOSCIENCES & APPLICATIONS, N.C.S.R. “DEMOKRITOS”, Ag. Paraskevi-Athens, Greece

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